The detailed information of tRNA gene sequence


Sequence ID>SRA1048494
Genome IDSRR035094.186671
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 434
End posion on genome 360
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agataaatga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGCGAGGCTCATAACCTCGAGGTCGCAGGTTCGAA
TCCTGTCCCCGCCACtc
Downstream region at tRNA end position 
gggtattttc
Secondary structure (Cloverleaf model)
>SRA1048494	Met	CAT
                   a      ACtc gggtattttc
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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