The detailed information of tRNA gene sequence


Sequence ID>SRA1048498
Genome IDSRR035094.187500
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 162
End posion on genome 73
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataaacaat
tRNA gene sequence 
GGAGGAGTCGCCTAGTTGGCCCATGGCGCACGCTTGGAAAGCGTGTGAGCTTTAACGCTC
ACGCGGGTTCGAATCCCGCCTCCTCCGCCA
Downstream region at tRNA end position 
tccagaaaat
Secondary structure (Cloverleaf model)
>SRA1048498	Ser	GGA
                   t      GCCA tccagaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G C C C     A
    T T G A        C      | | | | |     G
  G         T C C G       G C G G G     C
  G           | | |                 T T
  C         T G G C
    C C A          G     TGAGCTTTAACGCTCAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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