The detailed information of tRNA gene sequence


Sequence ID>SRA1048535
Genome IDSRR035094.195644
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 222
End posion on genome 297
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgaatcccgg
tRNA gene sequence 
GGCGGCGTACCCAAGCGGCTAAGGGAGCGGTCTGCAAAACCGTTATTCACCGGTTCGACT
CCGGTCGCCGCCTCCA
Downstream region at tRNA end position 
tttttatccc
Secondary structure (Cloverleaf model)
>SRA1048535	Cys	GCA
                   g      TCCA tttttatccc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     T G G C C     A
      C G A        A      | | | | |     G
    G       A C C C       A C C G G     C
    G         | | |                 T T
    C       A G G G
      T A          A     TATTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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