The detailed information of tRNA gene sequence


Sequence ID>SRA1048675
Genome IDSRR035094.224174
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 315
End posion on genome 241
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagaatctgt
tRNA gene sequence 
AGGCCTGTAGCATAATTGGCTAGTGCTCCGGACTCCAAATCCGGCGGTTGGGGGTTCGAC
TCCCTCCAGGCCTGCtt
Downstream region at tRNA end position 
tttgactttt
Secondary structure (Cloverleaf model)
>SRA1048675	Trp	CCA
                   t      GCtt tttgactttt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T C
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       T A C G       G G G G G     C
    G       + | | |                 T T
    G       G T G C
      C T A        T     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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