The detailed information of tRNA gene sequence


Sequence ID>SRA1048698
Genome IDSRR035094.230394
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 155
End posion on genome 231
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgaattcgc
tRNA gene sequence 
GGCGATGTAGCTCAGCTGGTTAGAGCATCGGAATCATAATCCGAGTGTCCGGGGTTCAAG
TCCCTGCATCGCTACCA
Downstream region at tRNA end position 
tttttttgct
Secondary structure (Cloverleaf model)
>SRA1048698	Met	CAT
                   c      ACCA tttttttgct
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     G T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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