The detailed information of tRNA gene sequence


Sequence ID>SRA1048710
Genome IDSRR035094.233216
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 182
End posion on genome 108
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaattttaa
tRNA gene sequence 
GGCAGGGTAGCTCAGTCGGTTAGAGCGTTGGATTCATAAACCAAAGGTCGTGGGTTCAAC
TCCCACCTCTGCTACtt
Downstream region at tRNA end position 
ttgtaaagtt
Secondary structure (Cloverleaf model)
>SRA1048710	Met	CAT
                   a      ACtt ttgtaaagtt
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     G + T
                     G - C          T C
                    T     C A C C C     A
      T G A        A      | | | | |     A
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    A   A
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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