The detailed information of tRNA gene sequence


Sequence ID>SRA1048711
Genome IDSRR035094.233216
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 93
End posion on genome 20
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtaaagtttt
tRNA gene sequence 
AGGGGCGTGGTTAAATGGTATAACAGCAGTCTCCAAAACTGCTATTGGGGGTTCGATTCC
CTCCGCCCCCTGCA
Downstream region at tRNA end position 
atttagcttt
Secondary structure (Cloverleaf model)
>SRA1048711	Trp	CCA
                   t      TGCA atttagcttt
                     A   C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C T C C C     A
        A A        G      | + | | |     G
      T     A T T G       G G G G G     C
      G     | | | |                 T T
      G     T A A C
        T A        A     TATT
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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