The detailed information of tRNA gene sequence


Sequence ID>SRA1048738
Genome IDSRR035094.237962
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 173
End posion on genome 247
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaaccacgt
tRNA gene sequence 
CGCGGGGTAGAGCAGAGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCAGGTTCGATTC
CTGCCCCCGCTACCA
Downstream region at tRNA end position 
attttttaga
Secondary structure (Cloverleaf model)
>SRA1048738	Met	CAT
                   t      ACCA attttttaga
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C G T C C     A
        G A        A      | | | | |     G
      A     C G A G       G C A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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