The detailed information of tRNA gene sequence


Sequence ID>SRA1048808
Genome IDSRR035094.254167
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 236
End posion on genome 329
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctgatatcc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAACGGTTTGCTAAACCGTCGTACTGGTAAAATCC
GGTACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ggcgtcttgt
Secondary structure (Cloverleaf model)
>SRA1048808	Ser	GCT
                   c      GCCA ggcgtcttgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTGGTAAAATCCGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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