The detailed information of tRNA gene sequence


Sequence ID>SRA1048828
Genome IDSRR035094.258816
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 336
End posion on genome 263
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggaaaactga
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCACTGTGCTGATAACGCAGGGGTCACTGGTTCGAA
TCCAGTCAGGCCCAtcc
Downstream region at tRNA end position 
ccccccgtat
Secondary structure (Cloverleaf model)
>SRA1048828	Ile	GAT
                   a      Atcc ccccccgtat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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