The detailed information of tRNA gene sequence


Sequence ID>SRA1048831
Genome IDSRR035094.259234
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 130
End posion on genome 39
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatataattt
tRNA gene sequence 
GGAGGGGTGGCAGAGTCTGGTTTAACGCGGCGGTCTTGAAAACCGTTGTGGGGTTATACC
CACCGGGGGTTCGAATCCTCTCCCCTCCGCCA
Downstream region at tRNA end position 
ttttttttac
Secondary structure (Cloverleaf model)
>SRA1048831	Ser	TGA
                   t      GCCA ttttttttac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
    C T G A        G      + | + | |     G
  T         G A C G       G G G G G     C
  G             | |                 T T
  G         A C G C
    T T T A        G     TGTGGGGTTATACCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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