The detailed information of tRNA gene sequence


Sequence ID>SRA1048873
Genome IDSRR035094.269673
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 197
End posion on genome 288
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagttataat
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTCGAAGGCGGCGGTCTTGAAAACCGTTGGTCCGTGGAAACGG
GTCCGTGGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
atttacaatc
Secondary structure (Cloverleaf model)
>SRA1048873	Ser	TGA
                   t      GCCA atttacaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGGTCCGTGGAAACGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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