The detailed information of tRNA gene sequence


Sequence ID>SRA1048937
Genome IDSRR035094.291130
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 27
End posion on genome 101
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tcgcttttgt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCCGCCACACTGGCAGTGTGGAGGTCAGGAGTTCGAT
CCTCCTTGGCTCCACtg
Downstream region at tRNA end position 
aagcgatgat
Secondary structure (Cloverleaf model)
>SRA1048937	Ala	GGC
                   t      ACtg aagcgatgat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          C     GAGGTC
                    G   G
                    C   T
                    C - G
                    A - T
                    C - G
                  A       A
                  C       C
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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