The detailed information of tRNA gene sequence


Sequence ID>SRA1048968
Genome IDSRR035094.298681
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 271
End posion on genome 199
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtccgtgcca
tRNA gene sequence 
CTCGGTTTGGCGTAACAGGCTAACGCGCAATCCTCATAAGGTTGAGTCCCCAGTTCGAGT
CTGGGAGCCGAGAttt
Downstream region at tRNA end position 
gatgttttga
Secondary structure (Cloverleaf model)
>SRA1048968	Met	CAT
                   a      Attt gatgttttga
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     T + G
                     T - A          T G
                    T     G G G T C     A
      C A A        G      | | | | |     G
    A       T G C G       C C C A G     C
    G       | | | |                 T T
    G       A C G C
      C T A        G     AGTC
                    C - G
                    A - T
                    A - T
                    T + G
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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