The detailed information of tRNA gene sequence


Sequence ID>SRA1049000
Genome IDSRR035094.308198
Search identical group
Phylum/Class454 Sequencing (SRP001815)
Species
Start position on genome 239
End posion on genome 153
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aactacaaaa
tRNA gene sequence 
GGAGGAGTATCCCTAATTGGCAAGGGTCCTGTTTCGAAAACAGGTGCCTTAAACGGCTTG
TGGGTTCGAGTCCCTCCTCCTCCGCCC
Downstream region at tRNA end position 
agataaactg
Secondary structure (Cloverleaf model)
>SRA1049000	Ser	CGA
                   a      GCCC agataaactg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      |   | | |     G
    T       C C C T       G T G G G     C
    T         | | +                 T T
    G       A G G G
      G C A        T     TGCCTTAAACGGCTT
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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