The detailed information of tRNA gene sequence


Sequence ID>SRA1049175
Genome IDSRR035095.32777
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 280
End posion on genome 372
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcgatcaagC
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAAGCGCGGGATTGCTAATCCTGTGTAGTCTAATTACGG
GCTACCGGGGGTTCGAATCCCCCCCTCTCCGTnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1049175	Ser	GCT
                   C      GTnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TGTAGTCTAATTACGGGCTACC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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