The detailed information of tRNA gene sequence


Sequence ID>SRA1049431
Genome IDSRR035095.77098
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 34
End posion on genome 119
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatataatag
tRNA gene sequence 
GGAGGGTTGGCCGAGTGGTCTATGGCGATGGTTTCGAAAACCATTCTCCCCTAGGGAGGC
ACAGGTTCGAATCCTGTACCCTCCGCag
Downstream region at tRNA end position 
gaaagatata
Secondary structure (Cloverleaf model)
>SRA1049431	Ser	CGA
                   g      GCag gaaagatata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G T C C     A
      T G A        G      | | | | |     G
    G       G C C G       A C A G G     C
    G       + | | |                 T T
    T       T G G C
      C T A        G     TCTCCCCTAGGGAGGC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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