The detailed information of tRNA gene sequence


Sequence ID>SRA1049432
Genome IDSRR035095.77355
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 216
End posion on genome 309
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatcatatat
tRNA gene sequence 
GGAGAGATGCCTGAGCTGGCTTAAGGGGCACGATTGGAAATCGTGTGAGGGGTTTATAGC
TTCTCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttttttcat
Secondary structure (Cloverleaf model)
>SRA1049432	Ser	GGA
                   t      GCCA tttttttcat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T C C       G A G G G     C
  G           + | |                 T T
  C         A G G G
    T T A          G     TGAGGGGTTTATAGCTTCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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