The detailed information of tRNA gene sequence


Sequence ID>SRA1049441
Genome IDSRR035095.78368
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 143
End posion on genome 219
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atctagtttg
tRNA gene sequence 
GGACGCATAGCTCAGTTGGTTAGAGCGCATGATTCACATTCATGAGGTCGAAGGTTCAAA
TCCCTCTGCGTCCACTA
Downstream region at tRNA end position 
tgaaaagaag
Secondary structure (Cloverleaf model)
>SRA1049441	Val	CAC
                   g      ACTA tgaaaagaag
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | |   | |     A
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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