The detailed information of tRNA gene sequence


Sequence ID>SRA1049486
Genome IDSRR035095.84999
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 260
End posion on genome 344
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gatttaattt
tRNA gene sequence 
GGAGAGTTCGCCTAGAGGCCTATGGCACTTGCTTGGAAAGCAGGCGGGTGAAAGCCCACG
AGGGTTCGAATCCCTCACTCTCCGCag
Downstream region at tRNA end position 
ttcgcaacaa
Secondary structure (Cloverleaf model)
>SRA1049486	Ser	GGA
                   t      GCag ttcgcaacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      A G A        C      | | | | |     G
    G       T C C G       G A G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        A     CGGGTGAAAGCCCAC
                    C - G
                    T + G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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