The detailed information of tRNA gene sequence


Sequence ID>SRA1049732
Genome IDSRR035095.129245
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 252
End posion on genome 343
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaaatagac
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGCCGAAAGCAGCCGCCTGCTAAGCGGTTGACCCTGTAAAAAGG
GTCCCCGGGTTCAAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
tattagtaat
Secondary structure (Cloverleaf model)
>SRA1049732	Ser	GCT
                   c      GCCA tattagtaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     A
    G       G T C G       C C G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        A     TGACCCTGTAAAAAGGGTCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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