The detailed information of tRNA gene sequence


Sequence ID>SRA1049788
Genome IDSRR035095.138778
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 572
End posion on genome 486
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaaagaatat
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTCTAGTGCACCGCTTTCGAAAAGCGGCAAGGTTAAAACCTCG
GGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
attttacaat
Secondary structure (Cloverleaf model)
>SRA1049788	Ser	CGA
                   t      GCCA attttacaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | + | | |     G
    G       T A C G       G G G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        A     CAAGGTTAAAACCTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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