The detailed information of tRNA gene sequence


Sequence ID>SRA1049844
Genome IDSRR035095.147001
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 104
End posion on genome 15
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgtcgggat
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGCTGATTGGGATCGCCTGCTAAGCGATTGTCGGGGTAAAACCT
GACCGAGGGTTCGAATCCCTCCTTCCCCGCtc
Downstream region at tRNA end position 
tagagtgcgt
Secondary structure (Cloverleaf model)
>SRA1049844	Ser	GCT
                   t      GCtc tagagtgcgt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G       + | | |                 T T
    C       T T G G
      T G A        G     TGTCGGGGTAAAACCTGACC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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