The detailed information of tRNA gene sequence


Sequence ID>SRA1049870
Genome IDSRR035095.150821
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 161
End posion on genome 71
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaaataacc
tRNA gene sequence 
GGAGAGGTGCAGGAGCGGCTTAACTGGCACGCCTGGAAAGCGTGTGTACTGCAAAACGGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
gattgaatcc
Secondary structure (Cloverleaf model)
>SRA1049870	Ser	GGA
                   c      GCAA gattgaatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G G A C       G A G G G     C
    G         | | |                 T T
    C       A C T G
      T T A        G     TGTACTGCAAAACGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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