The detailed information of tRNA gene sequence


Sequence ID>SRA1049937
Genome IDSRR035095.163281
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 500
End posion on genome 414
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatgcaaacc
tRNA gene sequence 
GGNGGGATGGCCGAGAGGTCGAAGGCGGCGGTCTTGAAAACCGTTTAACCGAAAGGTTCG
CGGGTTCGAATCCTGCTCCCTCCGCCA
Downstream region at tRNA end position 
tataaactca
Secondary structure (Cloverleaf model)
>SRA1049937	Ser	TGA
                   c      GCCA tataaactca
                     G - C
                     G - C
                     N   T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      A G A        G      | | + | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TTAACCGAAAGGTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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