The detailed information of tRNA gene sequence


Sequence ID>SRA1049943
Genome IDSRR035095.164422
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 358
End posion on genome 282
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgcgggtgt
tRNA gene sequence 
AGGCCAGTAGCTCAATTTGGCAGAGCACCGGTCTCCAAAACCGGGGGTTGGGGGTTCGAT
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ggaaaatgaa
Secondary structure (Cloverleaf model)
>SRA1049943	Trp	CCA
                   t      GCCA ggaaaatgaa
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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