The detailed information of tRNA gene sequence


Sequence ID>SRA1050103
Genome IDSRR035095.192321
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 296
End posion on genome 209
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttaaaaaat
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAGGCGTTGGTCTCGAACACCAATATAGTCGAAAGATTA
TCAAGAGTTCGAATCTCTTTCTCTCCGCtg
Downstream region at tRNA end position 
taatctcacc
Secondary structure (Cloverleaf model)
>SRA1050103	Ser	CGA
                   t      GCtg taatctcacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C T C     A
      T G A        G      | | | | |     G
    G       G T C G       A A G A G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TATAGTCGAAAGATTATC
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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