The detailed information of tRNA gene sequence


Sequence ID>SRA1050223
Genome IDSRR035095.215383
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 286
End posion on genome 212
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttttttat
tRNA gene sequence 
GGCGGCGTAGCTCAATCGGTTAGAGCGCGGGACTCATAAGCCCGAGGTTACAGGTTCGAT
TCCTGTCGCCGCTACtg
Downstream region at tRNA end position 
aaacttaata
Secondary structure (Cloverleaf model)
>SRA1050223	Met	CAT
                   t      ACtg aaacttaata
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    C       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    C - G
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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