The detailed information of tRNA gene sequence


Sequence ID>SRA1050229
Genome IDSRR035095.217143
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 219
End posion on genome 131
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acagcaatat
tRNA gene sequence 
GGAGAGGTGGCTCGAGCGGTTGAAGGCGTCTGATTCGAAATCAGATGAGCATGCAAGTGT
TCCGTGGGTTCAAATCCCACCCTCTCCGCag
Downstream region at tRNA end position 
tgacaatttt
Secondary structure (Cloverleaf model)
>SRA1050229	Ser	CGA
                   t      GCag tgacaatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C G A G        G      | | | | |     A
  G         C T C G       G T G G G     C
  G           + | |                 T T
  T         A G G C
    T G A          G     TGAGCATGCAAGTGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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