The detailed information of tRNA gene sequence


Sequence ID>SRA1050235
Genome IDSRR035095.218315
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 489
End posion on genome 399
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agggataata
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCGCACGCTTGGAAAGCGTGTGTATGCCAAAAGCGT
ACCGGGGGTTCGAATCCCTTCCTCTCCGCAA
Downstream region at tRNA end position 
aaagtgaatt
Secondary structure (Cloverleaf model)
>SRA1050235	Ser	GGA
                   a      GCAA aaagtgaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTATGCCAAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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