The detailed information of tRNA gene sequence


Sequence ID>SRA1050275
Genome IDSRR035095.227580
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 377
End posion on genome 452
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccactttaat
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGTCGGTTCGATC
CCGTCCAGCTCCACCA
Downstream region at tRNA end position 
tcnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1050275	Ala	GGC
                   t      ACCA tcnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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