The detailed information of tRNA gene sequence


Sequence ID>SRA1050285
Genome IDSRR035095.230554
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 343
End posion on genome 254
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttaaaataa
tRNA gene sequence 
GGAGGCGTGGCTTGAGCGGTCGAAAGCGACAGTCTTGAAAACTGTTGTTCGTTTACGCGG
ACCAGGGGGTTCGAATCCTCTCGCCTCCGCac
Downstream region at tRNA end position 
acacaccaaa
Secondary structure (Cloverleaf model)
>SRA1050285	Ser	TGA
                   a      GCac acacaccaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C G A G        G      + | + | |     G
  G         T T C G       G G G G G     C
  G         | | | |                 T T
  T         A A G C
    C G A          G     TGTTCGTTTACGCGGACCA
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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