The detailed information of tRNA gene sequence


Sequence ID>SRA1050344
Genome IDSRR035095.241277
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 147
End posion on genome 240
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggaagagtt
tRNA gene sequence 
GGAGAAGTCGCATAGTGGCCTAGTGCGGCGGTTTGCTAAACCGTTGTACGATTGAAAAGT
CGTACCCAGGGTTCGAATCCCTGCTTCTCCGCCA
Downstream region at tRNA end position 
tgaaccactc
Secondary structure (Cloverleaf model)
>SRA1050344	Ser	GCT
                   t      GCCA tgaaccactc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     G T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       C A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TGTACGATTGAAAAGTCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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