The detailed information of tRNA gene sequence


Sequence ID>W2011958367
Genome IDVAHC01000004
Search identical group
Phylum/ClassBacteroidota
SpeciesFlavobacterium sp. GSA192 [VAHC]
Start position on genome 279357
End posion on genome 279270
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaccgaaat
tRNA gene sequence 
AGAGAGGTGTCCGAGTGGTTGAAGGAGCTAGCCTGGAAAGCTAGTATGTGGGTAACTGCA
TCGAGGGTTCGAATCCCTTTCTCTCTGCga
Downstream region at tRNA end position 
tattgtctga
Secondary structure (Cloverleaf model)
>W2011958367	Ser	GGA
                   t      GCga tattgtctga
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATGTGGGTAACTGCATC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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