The detailed information of tRNA gene sequence


Sequence ID>W2011961598
Genome IDVANK01000002
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium AB60 [VANK]
Start position on genome 306861
End posion on genome 306955
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
caaattggat
tRNA gene sequence 
GGAAGTGCTTGGGCTCCGGTGATCCTCCCGGTCTTCAAAACCGGCGGTCGTCCTTGACGG
GCGACGGTGTGTTCGACTCACACGCACTTCCGCCA
Downstream region at tRNA end position 
gccaggtgga
Secondary structure (Cloverleaf model)
>W2011961598	SeC	TCA
                   t      GCCA gccaggtgga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T C
                    T     C A C A C     A
      C C T        T      | | | | |     G
    G       C G G G       G T G T G     C
    G         | | +                 T T
    T       T C C T
      G A          C     CGGTCGTCCTTGACGGGCGACG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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