The detailed information of tRNA gene sequence


Sequence ID>W2011964448
Genome IDVBRZ01000013
Search identical group
Phylum/ClassCandidatius Mariprofundia
SpeciesMariprofundus sp. P7 [VBRZ]
Start position on genome 88335
End posion on genome 88244
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gacaacatat
tRNA gene sequence 
GGAGAGGTACTCGAAGCGGTCACAACGGCACCGACTCGAAATCGGTTGGGGGCGAAAGTC
CCACGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
catataaaca
Secondary structure (Cloverleaf model)
>W2011964448	Ser	CGA
                   t      GCCA catataaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C G A A        A      | | | | |     G
  G         G C T C       G C G G G     C
  G             + |                 T T
  T         A C G G
    C A C A        C     TGGGGGCGAAAGTCCCAC
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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