The detailed information of tRNA gene sequence


Sequence ID>SRA1050460
Genome IDSRR035095.268101
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 113
End posion on genome 21
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcattcaaac
tRNA gene sequence 
GGAGAAATACCCAAGCCCGGCTGAAGGGATCGGTCTTGAAAACCGACAGGGCGTGAGAGC
GCCGCGGGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
tacacgtcaa
Secondary structure (Cloverleaf model)
>SRA1050460	Ser	TGA
                   c      GCCA tacacgtcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C C G A        A      | + | | |     G
  C         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGGCGTGAGAGCGCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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