The detailed information of tRNA gene sequence


Sequence ID>SRA1050499
Genome IDSRR035095.276734
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 296
End posion on genome 209
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcaccatcat
tRNA gene sequence 
GGTGCCGTATCGTAGCACGGTAGCGAGAAGGATTGCTATTCCTTTGAAGGTAACACTTTC
GAGAGTTCAAATCTCTCCGGCACCGCCA
Downstream region at tRNA end position 
ctttcacgag
Secondary structure (Cloverleaf model)
>SRA1050499	Ser	GCT
                   t      GCCA ctttcacgag
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | | | | |     A
    A       T G C T       G A G A G     C
    C       + | | |                 T T
    G       G C G A
      G T A        G     TGAAGGTAACACTTTC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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