The detailed information of tRNA gene sequence


Sequence ID>W2011980147
Genome IDVDCH01000002
Search identical group
Phylum/ClassChlorobiota
SpeciesChlorobaculum thiosulfatiphilum DSM 249 [VDCH]
Start position on genome 159097
End posion on genome 159170
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gccgattcaa
tRNA gene sequence 
GCCACCTTAGCTCAGTTGGTAGAGCAACTGTTTCGTAAATAGTAGGTCGTGGGTTCAAGT
CCCTCAGGTGGCTCgc
Downstream region at tRNA end position 
ttatgccgac
Secondary structure (Cloverleaf model)
>W2011980147	Thr	CGT
                   a      TCgc ttatgccgac
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          T G
                    T     C T C C C     A
      T G A        A      |   | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G + T
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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