The detailed information of tRNA gene sequence


Sequence ID>SRA1050571
Genome IDSRR035095.295299
Search identical group
Phylum/Class454 Sequencing (SRP001816)
Species
Start position on genome 274
End posion on genome 184
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtatttttT
tRNA gene sequence 
GGTGAGGTGGCCGAGTGGCTGAAGGCGGCTCCCTGCTAAGGAGTTATACGGGTTAAACTG
TATCGCGGGTTCGAATCCCGCCCTCACCGAtt
Downstream region at tRNA end position 
tctaaagatt
Secondary structure (Cloverleaf model)
>SRA1050571	Ser	GCT
                   T      GAtt tctaaagatt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGTTAAACTGTATC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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