The detailed information of tRNA gene sequence


Sequence ID>SRA1050762
Genome IDSRR035096.17586
Search identical group
Phylum/Class454 Sequencing (SRP001817)
Species
Start position on genome 449
End posion on genome 523
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccaataccgt
tRNA gene sequence 
GTAGGTGTGATGTTAACGGTAGCATGACGGTCTCCAAAACCGTTCGTCAGGGTTCAAATC
CTTGCACCTATGCCA
Downstream region at tRNA end position 
aatataagga
Secondary structure (Cloverleaf model)
>SRA1050762	Trp	CCA
                   t      GCCA aatataagga
                     G + T
                     T - A
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G T T C C     A
      A A T        G      | | + | |     A
    C       T G T A       C A G G G     C
    G       + | | |                 T T
    G       G C A T
      T A          G     TCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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