The detailed information of tRNA gene sequence


Sequence ID>SRA1050828
Genome IDSRR035096.27913
Search identical group
Phylum/Class454 Sequencing (SRP001817)
Species
Start position on genome 100
End posion on genome 187
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgaaaagaa
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACTCGTAAGGGTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCac
Downstream region at tRNA end position 
aaattgaaat
Secondary structure (Cloverleaf model)
>SRA1050828	Ser	GGA
                   a      GCac aaattgaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACTCGTAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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