The detailed information of tRNA gene sequence


Sequence ID>SRA1050840
Genome IDSRR035096.30115
Search identical group
Phylum/Class454 Sequencing (SRP001817)
Species
Start position on genome 454
End posion on genome 378
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
nnncaacgaG
tRNA gene sequence 
GGCGCCATGGCTTTAGTTGGTTAAAGCGCCTGTTTAGTAAACAGGAGATCCCGAGTTCGA
ATCTCGGTGGTGCCTAgt
Downstream region at tRNA end position 
gaaatcacat
Secondary structure (Cloverleaf model)
>SRA1050840	Thr	AGT
                   G      TAgt gaaatcacat
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     C - G
                     A - T          T A
                    T     G G C T C     A
    T G A T        G      | | | | |     G
  T         T T C G       C C G A G     C
  G         | | | |                 T T
  G         A A G C
    T T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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