The detailed information of tRNA gene sequence


Sequence ID>SRA1050940
Genome IDSRR035096.56011
Search identical group
Phylum/Class454 Sequencing (SRP001817)
Species
Start position on genome 380
End posion on genome 455
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgttttgtgt
tRNA gene sequence 
CGCGGAGTAGAGCAGTCTGGTTAGCTCGTTGGGCTCATAACCCGAAGGCCAGTGGTTCAA
ATCCACTCTCCGCTACac
Downstream region at tRNA end position 
tcacaannnn
Secondary structure (Cloverleaf model)
>SRA1050940	Met	CAT
                   t      ACac tcacaannnn
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C A C C     A
    C T G A        A      | | | | |     A
  T         C G A G       A G T G G     C
  G         | | | |                 T T
  G         G C T C
    T T A          G     AGGCC
                    T - A
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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