The detailed information of tRNA gene sequence


Sequence ID>W2012018714
Genome IDVFNH01000002
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHerbaspirillum sp. SJZ107 [VFNH]
Start position on genome 537315
End posion on genome 537239
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtaccagtt
tRNA gene sequence 
GGTGATATAGCTCAGTTGGTTAGAGCATAGCATTCATAATGCTAGGGTCGGTGGTTCAAG
TCCACCTATCACCACCA
Downstream region at tRNA end position 
gaataaggaa
Secondary structure (Cloverleaf model)
>W2012018714	Met	CAT
                   t      ACCA gaataaggaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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