The detailed information of tRNA gene sequence


Sequence ID>W2012018779
Genome IDVFNI01000010
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHerbaspirillum sp. SJZ106 [VFNI]
Start position on genome 10497
End posion on genome 10413
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tcgcgttatt
tRNA gene sequence 
GCCCACGTGGCGGAATTGGTAGACGCGCATGGTTCAGGTCCATGTGCCGCGAGGTGTGGG
GGTTCGAGTCCCTCCGTGGGCACCA
Downstream region at tRNA end position 
aaaacataaa
Secondary structure (Cloverleaf model)
>W2012018779	Leu	CAG
                   t      ACCA aaaacataaa
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGCCGCGAGGTGT
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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