The detailed information of tRNA gene sequence


Sequence ID>W2012021563
Genome IDVFPI01000007
Search identical group
Phylum/ClassActinomycetota
SpeciesHalopolyspora algeriensis DSM 46680 [VFPI]
Start position on genome 9143
End posion on genome 9057
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
actcgttcgc
tRNA gene sequence 
GGAGGATTGGCCGAGCGGCCTAAGGCGCACGATTGGAAATCGTGTAAGGGCATCCCCCTT
CACGGGTTCGAATCCCGTATCCTCCGCag
Downstream region at tRNA end position 
gtcacagggc
Secondary structure (Cloverleaf model)
>W2012021563	Ser	GGA
                   c      GCag gtcacagggc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       A C G G G     C
    G         | | |                 T T
    C       A G G C
      C T A        G     TAAGGGCATCCCCCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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