The detailed information of tRNA gene sequence


Sequence ID>SRA1051079
Genome IDSRR035096.80767
Search identical group
Phylum/Class454 Sequencing (SRP001817)
Species
Start position on genome 269
End posion on genome 185
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaactagtac
tRNA gene sequence 
GAAATAGTGGCGTCGAGTGGTTAAGGCGTTGGACTGCTAATCCAATGGGCTCTGCCCGCG
TGGGTTCGAATCCCATCGTTGTCGTaa
Downstream region at tRNA end position 
atttttattt
Secondary structure (Cloverleaf model)
>SRA1051079	Ser	GCT
                   c      GTaa atttttattt
                     G - C
                     A - T
                     A   G
                     A - T
                     T   T
                     A   G
                     G - C          T A
                    T     T A C C C     A
    G A G C        G      + | | | |     G
  T         T G C G       G T G G G     C
  G         |   | |                 T T
  G         A G G C
    T T A          G     TGGGCTCTGCCCGC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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