The detailed information of tRNA gene sequence


Sequence ID>W2012030200
Genome IDVHIF01000001
Search identical group
Phylum/ClassBacteroidota
SpeciesArenibacter palladensis MAR_2009_79 [VHIF]
Start position on genome 3278658
End posion on genome 3278570
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aactataact
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACCCCACAAGGGT
ATCGAGGGTTCGAATCCCTTCCTCTCTGCtg
Downstream region at tRNA end position 
ttaagtttta
Secondary structure (Cloverleaf model)
>W2012030200	Ser	GGA
                   t      GCtg ttaagtttta
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACCCCACAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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