The detailed information of tRNA gene sequence


Sequence ID>W2012031540
Genome IDVHLC01000037
Search identical group
Phylum/ClassMyxococcota
SpeciesMyxococcus sp. AB036A [VHLC]
Start position on genome 70157
End posion on genome 70255
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatcgcaaac
tRNA gene sequence 
GGTAGGGCCTCCGGACCTGGTGGCCGGCCCGGTCTTCAAAACCGGTGAGGGGCGCCGAGA
GGCGTCCCTGGCGAGTTCGATTCCCGTGCCCTACCGCCA
Downstream region at tRNA end position 
cctttttccc
Secondary structure (Cloverleaf model)
>W2012031540	SeC	TCA
                   c      GCCA cctttttccc
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T T
                    C     T G C C C     A
      C C A        T      + | |   |     G
    T       G G C C       G C G A G     C
    G       | | | |                 T T
    G       C C G G
      T G G        C     TGAGGGGCGCCGAGAGGCGTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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